STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2773Conserved hypothetical protein; Identified by similarity to GB:BAC91411.1. (460 aa)    
Predicted Functional Partners:
hemDX
Porphyrin biosynthesis protein HemDX; Also 4.2.1.75; identified by similarity to GB:AAK00606.1; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469.
  
 
 0.668
FSU_0573
Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237; match to protein family HMM TIGR02356.
    
 0.604
FSU_1328
Putative transporter; Identified by similarity to GB:AAQ65338.1.
  
    0.512
FSU_1329
Putative membrane protein.
  
    0.512
FSU_1465
Putative membrane protein; Identified by similarity to PIR:S76926.
  
     0.504
FSU_1921
Glyoxalase family protein; Identified by similarity to GB:AAP27170.1; match to protein family HMM PF00903.
  
  
 0.502
cel-3
Endoglucanase 3; Exhibits both endoglucanase and cellobiosidase activities.
       0.488
FSU_0300
Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.
  
 
 0.433
FSU_1155
Conserved hypothetical protein; Identified by similarity to GB:CAD78756.1.
  
     0.428
FSU_2328
Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561.
 
 
 0.417
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.