STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
FSU_2872Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (386 aa)    
Predicted Functional Partners:
FSU_3096
Conserved hypothetical protein; Identified by similarity to GB:BAC13577.1.
  
    0.876
cdsA
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
 
 
 0.859
FSU_0332
Putative phosphatidylglycerophosphatase A; Identified by similarity to SP:P18200; match to protein family HMM PF04608.
 
  
 0.815
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
 0.791
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.789
FSU_0852
Putative CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by similarity to SP:Q48269; match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.710
FSU_1095
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
     0.664
FSU_0522
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
 
 
 0.627
FSU_1427
Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009.
  
 0.627
FSU_0051
acyltransferase/AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF01553; match to protein family HMM PF07690.
  
 0.618
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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