STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2875Conserved hypothetical protein; Identified by similarity to GB:CAD76504.1. (308 aa)    
Predicted Functional Partners:
FSU_0405
Putative peptide chain release factor; Identified by similarity to GB:AAP04114.1.
 
     0.776
FSU_2876
Hypothetical protein; Identified by glimmer; putative.
       0.592
FSU_0622
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.579
FSU_0643
Identified by match to protein family HMM PF01704.
  
     0.571
trmB
Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.566
FSU_0934
Putative transporter; Identified by similarity to GB:AAN68395.1.
  
     0.544
FSU_1098
Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065.
  
     0.476
FSU_0364
Diacylglycerol kinase domain protein; Identified by match to protein family HMM PF00609; match to protein family HMM PF00781.
 
     0.475
FSU_2872
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.474
FSU_1626
Identified by match to protein family HMM PF01564.
 
    0.469
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.