xseA protein (Fibrobacter succinogenes) - STRING interaction network

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xseA

Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family. (432 aa)

Predicted Functional Partners:

FSU_2759

0.993

folD

0.611

FSU_2885

0.540

recN

0.504

FSU_1299

0.406

crtE

0.406

FSU_2434

0.403

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_1299	FSU_2759	FSU_1299	FSU_2759	Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.	Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.	0.469
FSU_1299	xseA	FSU_1299	FSU_2884	Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	0.406
FSU_2434	xseA	FSU_2434	FSU_2884	Hypothetical protein; Identified by glimmer; putative.	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	0.403
FSU_2759	FSU_1299	FSU_2759	FSU_1299	Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.	Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.	0.469
FSU_2759	crtE	FSU_2759	FSU_2135	Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.	Geranylgeranyl diphosphate synthase; Identified by similarity to GB:BAA82613.1; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.	0.469
FSU_2759	xseA	FSU_2759	FSU_2884	Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	0.993
FSU_2885	xseA	FSU_2885	FSU_2884	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	0.540
crtE	FSU_2759	FSU_2135	FSU_2759	Geranylgeranyl diphosphate synthase; Identified by similarity to GB:BAA82613.1; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.	Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.	0.469
crtE	xseA	FSU_2135	FSU_2884	Geranylgeranyl diphosphate synthase; Identified by similarity to GB:BAA82613.1; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	0.406
folD	xseA	FSU_1983	FSU_2884	Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	0.611
recN	xseA	FSU_2873	FSU_2884	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	0.504
xseA	FSU_1299	FSU_2884	FSU_1299	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.	0.406
xseA	FSU_2434	FSU_2884	FSU_2434	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	Hypothetical protein; Identified by glimmer; putative.	0.403
xseA	FSU_2759	FSU_2884	FSU_2759	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.	0.993
xseA	FSU_2885	FSU_2884	FSU_2885	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.540
xseA	crtE	FSU_2884	FSU_2135	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	Geranylgeranyl diphosphate synthase; Identified by similarity to GB:BAA82613.1; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.	0.406
xseA	folD	FSU_2884	FSU_1983	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.	0.611
xseA	recN	FSU_2884	FSU_2873	Exodeoxyribonuclease VII, large subunit; Identified by match to protein family HMM PF02601; match to protein family HMM TIGR00237; Belongs to the XseA family.	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	0.504

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