FSU_2898 protein (Fibrobacter succinogenes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

FSU_2898

Putative lipoprotein. (536 aa)

Predicted Functional Partners:

FSU_2535

0.851

FSU_1195

0.823

FSU_2741

0.797

FSU_2294

0.783

FSU_3006

0.782

xynC

0.775

xynE

0.771

FSU_2851

0.770

FSU_2292

0.768

FSU_2866

0.765

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_1195	FSU_2535	FSU_1195	FSU_2535	Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331.	Conserved hypothetical protein; Identified by similarity to PIR:F87639.	0.708
FSU_1195	FSU_2741	FSU_1195	FSU_2741	Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331.	Putative xylanase; Identified by match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.	0.805
FSU_1195	FSU_2866	FSU_1195	FSU_2866	Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331.	BNR repeat protein; Identified by match to protein family HMM PF02012.	0.756
FSU_1195	FSU_2898	FSU_1195	FSU_2898	Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331.	Putative lipoprotein.	0.823
FSU_1195	FSU_3006	FSU_1195	FSU_3006	Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331.	Putative endo-1,4-beta-xylanase; Identified by similarity to SP:P35811; match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.	0.787
FSU_1195	xynC	FSU_1195	FSU_0777	Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331.	Endo-1,4-beta-xylanase; Cleaves xylans with the production of xylose, xylobiose and xylo-oligosaccharides.	0.770
FSU_2292	FSU_2535	FSU_2292	FSU_2535	Xylanase XynD; Identified by similarity to GB:AAG36764.1; match to protein family HMM PF00331; match to protein family HMM PF03422.	Conserved hypothetical protein; Identified by similarity to PIR:F87639.	0.658
FSU_2292	FSU_2741	FSU_2292	FSU_2741	Xylanase XynD; Identified by similarity to GB:AAG36764.1; match to protein family HMM PF00331; match to protein family HMM PF03422.	Putative xylanase; Identified by match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.	0.764
FSU_2292	FSU_2866	FSU_2292	FSU_2866	Xylanase XynD; Identified by similarity to GB:AAG36764.1; match to protein family HMM PF00331; match to protein family HMM PF03422.	BNR repeat protein; Identified by match to protein family HMM PF02012.	0.770
FSU_2292	FSU_2898	FSU_2292	FSU_2898	Xylanase XynD; Identified by similarity to GB:AAG36764.1; match to protein family HMM PF00331; match to protein family HMM PF03422.	Putative lipoprotein.	0.768
FSU_2292	FSU_3006	FSU_2292	FSU_3006	Xylanase XynD; Identified by similarity to GB:AAG36764.1; match to protein family HMM PF00331; match to protein family HMM PF03422.	Putative endo-1,4-beta-xylanase; Identified by similarity to SP:P35811; match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.	0.760
FSU_2292	xynC	FSU_2292	FSU_0777	Xylanase XynD; Identified by similarity to GB:AAG36764.1; match to protein family HMM PF00331; match to protein family HMM PF03422.	Endo-1,4-beta-xylanase; Cleaves xylans with the production of xylose, xylobiose and xylo-oligosaccharides.	0.762
FSU_2294	FSU_2535	FSU_2294	FSU_2535	Xylanase XynB; Identified by match to protein family HMM PF00331; match to protein family HMM PF03422.	Conserved hypothetical protein; Identified by similarity to PIR:F87639.	0.692
FSU_2294	FSU_2741	FSU_2294	FSU_2741	Xylanase XynB; Identified by match to protein family HMM PF00331; match to protein family HMM PF03422.	Putative xylanase; Identified by match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.	0.812
FSU_2294	FSU_2866	FSU_2294	FSU_2866	Xylanase XynB; Identified by match to protein family HMM PF00331; match to protein family HMM PF03422.	BNR repeat protein; Identified by match to protein family HMM PF02012.	0.770
FSU_2294	FSU_2898	FSU_2294	FSU_2898	Xylanase XynB; Identified by match to protein family HMM PF00331; match to protein family HMM PF03422.	Putative lipoprotein.	0.783
FSU_2294	FSU_3006	FSU_2294	FSU_3006	Xylanase XynB; Identified by match to protein family HMM PF00331; match to protein family HMM PF03422.	Putative endo-1,4-beta-xylanase; Identified by similarity to SP:P35811; match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.	0.777
FSU_2294	xynC	FSU_2294	FSU_0777	Xylanase XynB; Identified by match to protein family HMM PF00331; match to protein family HMM PF03422.	Endo-1,4-beta-xylanase; Cleaves xylans with the production of xylose, xylobiose and xylo-oligosaccharides.	0.773
FSU_2294	xynE	FSU_2294	FSU_2293	Xylanase XynB; Identified by match to protein family HMM PF00331; match to protein family HMM PF03422.	Xylanase XynE; Identified by similarity to GB:AAG36765.1; match to protein family HMM PF00331; match to protein family HMM PF03422.	0.415
FSU_2535	FSU_1195	FSU_2535	FSU_1195	Conserved hypothetical protein; Identified by similarity to PIR:F87639.	Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331.	0.708