FSU_2904 protein (Fibrobacter succinogenes) - STRING interaction network

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[Homology]

Score

FSU_2904

Putative DNA topoisomerase III; Identified by match to protein family HMM PF01131; match to protein family HMM PF01751. (1049 aa)

Predicted Functional Partners:

FSU_1321

0.938

recQ

0.826

nifJ

0.808

recA

0.745

FSU_2905

0.655

hepA

0.609

FSU_2126

0.559

polA

0.538

FSU_1639

0.518

FSU_2163

0.518

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_1321	FSU_1639	FSU_1321	FSU_1639	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	0.934
FSU_1321	FSU_2126	FSU_1321	FSU_2126	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	Putative DnaQ family exonuclease/DinG family helicase; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573.	0.948
FSU_1321	FSU_2163	FSU_1321	FSU_2163	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	Conserved domain protein; Identified by similarity to GB:BAC62598.1.	0.934
FSU_1321	FSU_2904	FSU_1321	FSU_2904	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	Putative DNA topoisomerase III; Identified by match to protein family HMM PF01131; match to protein family HMM PF01751.	0.938
FSU_1321	hepA	FSU_1321	FSU_0598	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	0.959
FSU_1321	polA	FSU_1321	FSU_1227	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.964
FSU_1321	recA	FSU_1321	FSU_2927	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.945
FSU_1321	recQ	FSU_1321	FSU_1079	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	0.813
FSU_1639	FSU_1321	FSU_1639	FSU_1321	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	0.934
FSU_1639	FSU_2126	FSU_1639	FSU_2126	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	Putative DnaQ family exonuclease/DinG family helicase; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573.	0.582
FSU_1639	FSU_2904	FSU_1639	FSU_2904	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	Putative DNA topoisomerase III; Identified by match to protein family HMM PF01131; match to protein family HMM PF01751.	0.518
FSU_1639	hepA	FSU_1639	FSU_0598	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	0.725
FSU_1639	polA	FSU_1639	FSU_1227	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.954
FSU_1639	recA	FSU_1639	FSU_2927	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.655
FSU_1639	recQ	FSU_1639	FSU_1079	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	0.688
FSU_2126	FSU_1321	FSU_2126	FSU_1321	Putative DnaQ family exonuclease/DinG family helicase; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573.	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	0.948
FSU_2126	FSU_1639	FSU_2126	FSU_1639	Putative DnaQ family exonuclease/DinG family helicase; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573.	Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.	0.582
FSU_2126	FSU_2163	FSU_2126	FSU_2163	Putative DnaQ family exonuclease/DinG family helicase; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573.	Conserved domain protein; Identified by similarity to GB:BAC62598.1.	0.582
FSU_2126	FSU_2904	FSU_2126	FSU_2904	Putative DnaQ family exonuclease/DinG family helicase; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573.	Putative DNA topoisomerase III; Identified by match to protein family HMM PF01131; match to protein family HMM PF01751.	0.559
FSU_2126	hepA	FSU_2126	FSU_0598	Putative DnaQ family exonuclease/DinG family helicase; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573.	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	0.601

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