Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
FSU_0874 | FSU_2941 | Identified by match to protein family HMM PF01145. | Conserved hypothetical protein; Identified by similarity to SP:P54466. | 0.514 |
FSU_0874 | FSU_2942 | Identified by match to protein family HMM PF01145. | Identified by match to protein family HMM PF01957. | 0.439 |
FSU_2940 | FSU_2941 | Conserved domain protein; Identified by similarity to GB:AAC82332.1. | Conserved hypothetical protein; Identified by similarity to SP:P54466. | 0.709 |
FSU_2940 | FSU_2942 | Conserved domain protein; Identified by similarity to GB:AAC82332.1. | Identified by match to protein family HMM PF01957. | 0.537 |
FSU_2941 | FSU_0874 | Conserved hypothetical protein; Identified by similarity to SP:P54466. | Identified by match to protein family HMM PF01145. | 0.514 |
FSU_2941 | FSU_2940 | Conserved hypothetical protein; Identified by similarity to SP:P54466. | Conserved domain protein; Identified by similarity to GB:AAC82332.1. | 0.709 |
FSU_2941 | FSU_2942 | Conserved hypothetical protein; Identified by similarity to SP:P54466. | Identified by match to protein family HMM PF01957. | 0.984 |
FSU_2941 | FSU_2943 | Conserved hypothetical protein; Identified by similarity to SP:P54466. | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.410 |
FSU_2942 | FSU_0874 | Identified by match to protein family HMM PF01957. | Identified by match to protein family HMM PF01145. | 0.439 |
FSU_2942 | FSU_2940 | Identified by match to protein family HMM PF01957. | Conserved domain protein; Identified by similarity to GB:AAC82332.1. | 0.537 |
FSU_2942 | FSU_2941 | Identified by match to protein family HMM PF01957. | Conserved hypothetical protein; Identified by similarity to SP:P54466. | 0.984 |
FSU_2942 | FSU_2943 | Identified by match to protein family HMM PF01957. | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.529 |
FSU_2943 | FSU_2941 | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Conserved hypothetical protein; Identified by similarity to SP:P54466. | 0.410 |
FSU_2943 | FSU_2942 | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Identified by match to protein family HMM PF01957. | 0.529 |