FSU_2956 protein (Fibrobacter succinogenes) - STRING interaction network

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FSU_2956

Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055. (467 aa)

Predicted Functional Partners:

FSU_2957

0.775

def

0.727

rlmN

0.569

FSU_2471

0.493

FSU_1607

0.426

FSU_1466

0.407

FSU_2456

0.405

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_1466	FSU_1607	FSU_1466	FSU_1607	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.470
FSU_1466	FSU_2456	FSU_1466	FSU_2456	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.838
FSU_1466	FSU_2956	FSU_1466	FSU_2956	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	0.407
FSU_1607	FSU_1466	FSU_1607	FSU_1466	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.470
FSU_1607	FSU_2956	FSU_1607	FSU_2956	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	0.426
FSU_2456	FSU_1466	FSU_2456	FSU_1466	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.838
FSU_2456	FSU_2956	FSU_2456	FSU_2956	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	0.405
FSU_2471	FSU_2956	FSU_2471	FSU_2956	ATP-binding protein, Mrp/Nbp35 family; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	0.493
FSU_2956	FSU_1466	FSU_2956	FSU_1466	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.407
FSU_2956	FSU_1607	FSU_2956	FSU_1607	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.426
FSU_2956	FSU_2456	FSU_2956	FSU_2456	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.405
FSU_2956	FSU_2471	FSU_2956	FSU_2471	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	ATP-binding protein, Mrp/Nbp35 family; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.	0.493
FSU_2956	FSU_2957	FSU_2956	FSU_2957	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	Stage II sporulation protein D-like protein; Identified by similarity to SP:P07372; similarity to SP:Q02113; match to protein family HMM PF08486; match to protein family HMM TIGR02669.	0.775
FSU_2956	def	FSU_2956	FSU_2958	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.727
FSU_2956	rlmN	FSU_2956	FSU_0751	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.	0.569
FSU_2957	FSU_2956	FSU_2957	FSU_2956	Stage II sporulation protein D-like protein; Identified by similarity to SP:P07372; similarity to SP:Q02113; match to protein family HMM PF08486; match to protein family HMM TIGR02669.	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	0.775
FSU_2957	def	FSU_2957	FSU_2958	Stage II sporulation protein D-like protein; Identified by similarity to SP:P07372; similarity to SP:Q02113; match to protein family HMM PF08486; match to protein family HMM TIGR02669.	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.679
def	FSU_2956	FSU_2958	FSU_2956	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	0.727
def	FSU_2957	FSU_2958	FSU_2957	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Stage II sporulation protein D-like protein; Identified by similarity to SP:P07372; similarity to SP:Q02113; match to protein family HMM PF08486; match to protein family HMM TIGR02669.	0.679
rlmN	FSU_2956	FSU_0751	FSU_2956	23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.	Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055.	0.569

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