Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| FSU_0217 | FSU_1945 | Putative 6-pyruvoyl tetrahydrobiopterin synthase; Identified by match to protein family HMM PF01242. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.583 |
| FSU_0217 | FSU_2116 | Putative 6-pyruvoyl tetrahydrobiopterin synthase; Identified by match to protein family HMM PF01242. | Putative transcriptional regulator; Identified by similarity to SP:P03020; match to protein family HMM PF00027. | 0.583 |
| FSU_0217 | FSU_2960 | Putative 6-pyruvoyl tetrahydrobiopterin synthase; Identified by match to protein family HMM PF01242. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.583 |
| FSU_0217 | FSU_2961 | Putative 6-pyruvoyl tetrahydrobiopterin synthase; Identified by match to protein family HMM PF01242. | Hypothetical protein; Identified by glimmer; putative. | 0.583 |
| FSU_0711 | FSU_2402 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515. | Conserved hypothetical protein; Identified by similarity to GB:AAO22897.1. | 0.403 |
| FSU_0711 | FSU_2403 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515. | Identified by match to protein family HMM TIGR01352. | 0.554 |
| FSU_0711 | FSU_2960 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.439 |
| FSU_0916 | FSU_2402 | Alginate lyase-like protein; Identified by similarity to GB:BAC87758.1. | Conserved hypothetical protein; Identified by similarity to GB:AAO22897.1. | 0.418 |
| FSU_0916 | FSU_2960 | Alginate lyase-like protein; Identified by similarity to GB:BAC87758.1. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.529 |
| FSU_1945 | FSU_0217 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Putative 6-pyruvoyl tetrahydrobiopterin synthase; Identified by match to protein family HMM PF01242. | 0.583 |
| FSU_1945 | FSU_2116 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Putative transcriptional regulator; Identified by similarity to SP:P03020; match to protein family HMM PF00027. | 0.924 |
| FSU_1945 | FSU_2329 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Conserved domain protein; Identified by similarity to GB:BAC15296.1. | 0.514 |
| FSU_1945 | FSU_2402 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Conserved hypothetical protein; Identified by similarity to GB:AAO22897.1. | 0.479 |
| FSU_1945 | FSU_2403 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Identified by match to protein family HMM TIGR01352. | 0.574 |
| FSU_1945 | FSU_2960 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.957 |
| FSU_1945 | FSU_2995 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | Adenylate/guanylate cyclase domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | 0.839 |
| FSU_2116 | FSU_0217 | Putative transcriptional regulator; Identified by similarity to SP:P03020; match to protein family HMM PF00027. | Putative 6-pyruvoyl tetrahydrobiopterin synthase; Identified by match to protein family HMM PF01242. | 0.583 |
| FSU_2116 | FSU_1945 | Putative transcriptional regulator; Identified by similarity to SP:P03020; match to protein family HMM PF00027. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.924 |
| FSU_2116 | FSU_2329 | Putative transcriptional regulator; Identified by similarity to SP:P03020; match to protein family HMM PF00027. | Conserved domain protein; Identified by similarity to GB:BAC15296.1. | 0.514 |
| FSU_2116 | FSU_2960 | Putative transcriptional regulator; Identified by similarity to SP:P03020; match to protein family HMM PF00027. | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027. | 0.900 |
page 1 of 3