STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2984Hypothetical protein; Identified by glimmer; putative. (114 aa)    
Predicted Functional Partners:
FSU_1485
Putative D-methionine transport system permease protein MetI; Identified by similarity to SP:P31547; match to protein family HMM PF00528.
  
 0.861
FSU_1486
Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
  
 0.822
FSU_2983
Hypothetical protein; Identified by glimmer; putative.
       0.768
FSU_2985
MATE efflux family protein; Identified by similarity to GB:BAB64566.1; match to protein family HMM PF01554; match to protein family HMM TIGR00797.
       0.741
FSU_2986
Glycosyl hydrolase, family 16; Identified by match to protein family HMM PF00722.
       0.455
FSU_0558
O-acetylhomoserine sulfhydrylase; Identified by similarity to PIR:T44655; match to protein family HMM PF01053; match to protein family HMM TIGR01326.
  
    0.403
FSU_0565
Cys/Met metabolism PLP-dependent enzyme; Identified by match to protein family HMM PF01053.
  
    0.403
FSU_1526
O-acetylhomoserine sulfhydrylase; Identified by similarity to PIR:T44655; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326.
  
    0.403
FSU_1584
O-acetylhomoserine sulfhydrylase; Identified by similarity to PIR:T44655; match to protein family HMM PF01053; match to protein family HMM TIGR01326.
  
    0.403
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.