STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_3055ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (275 aa)    
Predicted Functional Partners:
FSU_2763
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
0.943
FSU_0025
Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.
 
  
 
0.938
FSU_2760
ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL01RS1379; match to protein family HMM PF00005.
  
 
0.931
FSU_3073
Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.
 
  
 
0.913
FSU_1701
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
0.912
FSU_1465
Putative membrane protein; Identified by similarity to PIR:S76926.
  
 0.879
FSU_2456
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.850
FSU_3054
Conserved domain protein; Identified by similarity to PIR:D97129.
       0.773
FSU_1687
Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by similarity to PIR:S75333; match to protein family HMM PF00005.
  
  0.760
FSU_1661
Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.
  
  
 0.741
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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