STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_3072Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (219 aa)    
Predicted Functional Partners:
FSU_3071
Putative amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 0.999
FSU_3073
Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.
 0.999
FSU_0025
Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.
 
 0.991
FSU_0342
Extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497.
 
 0.979
FSU_1486
Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
   
 0.785
FSU_0024
Putative amino acid ABC transporter, permease/amino acid-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
0.694
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
    
 0.653
ftsE
Cell division ABC transporter, ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
      0.640
FSU_1181
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
      0.614
FSU_2760
ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL01RS1379; match to protein family HMM PF00005.
 
      0.610
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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