STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_3083Putative metal ABC transporter, permease protein; Identified by similarity to GB:AAD56938.1; match to protein family HMM PF00950. (268 aa)    
Predicted Functional Partners:
FSU_0975
Putative metal ABC transporter, ATP-binding protein; Identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005.
 0.994
FSU_0976
Putative metal ABC transporter, periplasmic metal-binding adhesion liprotein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
 
 0.991
FSU_1654
Putative metal ABC transporter, ATP-binding protein; Identified by similarity to SP:Q9PJX9; match to protein family HMM PF00005.
 0.991
FSU_1653
Putative metal ABC transporter, periplasmic metal-binding adhesion liprotein; Identified by similarity to SP:Q53891; match to protein family HMM PF01297.
 
 
 0.986
FSU_1655
Putative metal ABC transporter, permease protein; Identified by match to protein family HMM PF00950.
  
  
 
0.927
FSU_3084
Hypothetical protein; Identified by glimmer; putative.
       0.759
FSU_3082
Putative hydrolase.
       0.669
FSU_3081
Putative deoxyguanosinetriphosphate triphosphohydrolase; Identified by similarity to SP:P15723; match to protein family HMM TIGR01353.
       0.651
FSU_3080
Identified by match to protein family HMM PF00149.
       0.534
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
    0.521
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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