FSU_3090 protein (Fibrobacter succinogenes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

FSU_3090

Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. (761 aa)

Predicted Functional Partners:

FSU_1828

0.787

FSU_0504

0.777

dnaN

0.697

FSU_2329

0.694

htpG

0.690

ald

0.631

FSU_2456

0.585

FSU_2334

0.489

FSU_1466

0.474

FSU_1607

0.469

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0504	FSU_2329	FSU_0504	FSU_2329	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	Conserved domain protein; Identified by similarity to GB:BAC15296.1.	0.461
FSU_0504	FSU_2334	FSU_0504	FSU_2334	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	Putative chaperone protein DnaK; Identified by match to protein family HMM PF00012.	0.726
FSU_0504	FSU_2456	FSU_0504	FSU_2456	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.752
FSU_0504	FSU_3090	FSU_0504	FSU_3090	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.	0.777
FSU_0504	ald	FSU_0504	FSU_0366	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	Aldehyde dehydrogenase; Identified by similarity to SP:P46329; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	0.418
FSU_0504	htpG	FSU_0504	FSU_0677	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.	0.467
FSU_1466	FSU_2456	FSU_1466	FSU_2456	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.873
FSU_1466	FSU_3090	FSU_1466	FSU_3090	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.	0.474
FSU_1607	FSU_3090	FSU_1607	FSU_3090	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.	0.469
FSU_1828	FSU_3090	FSU_1828	FSU_3090	Conserved hypothetical protein; Identified by similarity to GB:BAB79866.1; match to protein family HMM PF08719; match to protein family HMM TIGR02464.	Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.	0.787
FSU_2329	FSU_0504	FSU_2329	FSU_0504	Conserved domain protein; Identified by similarity to GB:BAC15296.1.	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	0.461
FSU_2329	FSU_2334	FSU_2329	FSU_2334	Conserved domain protein; Identified by similarity to GB:BAC15296.1.	Putative chaperone protein DnaK; Identified by match to protein family HMM PF00012.	0.519
FSU_2329	FSU_3090	FSU_2329	FSU_3090	Conserved domain protein; Identified by similarity to GB:BAC15296.1.	Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.	0.694
FSU_2329	ald	FSU_2329	FSU_0366	Conserved domain protein; Identified by similarity to GB:BAC15296.1.	Aldehyde dehydrogenase; Identified by similarity to SP:P46329; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	0.626
FSU_2329	htpG	FSU_2329	FSU_0677	Conserved domain protein; Identified by similarity to GB:BAC15296.1.	Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.	0.876
FSU_2334	FSU_0504	FSU_2334	FSU_0504	Putative chaperone protein DnaK; Identified by match to protein family HMM PF00012.	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	0.726
FSU_2334	FSU_2329	FSU_2334	FSU_2329	Putative chaperone protein DnaK; Identified by match to protein family HMM PF00012.	Conserved domain protein; Identified by similarity to GB:BAC15296.1.	0.519
FSU_2334	FSU_3090	FSU_2334	FSU_3090	Putative chaperone protein DnaK; Identified by match to protein family HMM PF00012.	Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.	0.489
FSU_2334	htpG	FSU_2334	FSU_0677	Putative chaperone protein DnaK; Identified by match to protein family HMM PF00012.	Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.	0.991
FSU_2456	FSU_0504	FSU_2456	FSU_0504	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	0.752