STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_3091Conserved domain protein; Identified by similarity to GB:AAP76647.1; match to protein family HMM PF03382; match to protein family HMM TIGR02167. (260 aa)    
Predicted Functional Partners:
FSU_3092
PDZ domain protein; Identified by match to protein family HMM PF00595.
  
   0.620
FSU_3093
Hypothetical protein; Identified by glimmer; putative.
       0.510
FSU_3094
Conserved hypothetical protein; Identified by similarity to GB:AAO77240.1.
       0.510
FSU_3090
Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.
       0.431
maf
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.414
FSU_3096
Conserved hypothetical protein; Identified by similarity to GB:BAC13577.1.
       0.402
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.