STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_3179Peptidase, M23/M37 family; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. (315 aa)    
Predicted Functional Partners:
FSU_2426
Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551.
 
   
 0.829
FSU_1317
Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551.
  
  
 0.780
mrcA
Penicillin-binding protein 1A; Identified by similarity to SP:P02918; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074.
 
  
 0.699
mltG
Conserved hypothetical protein TIGR00247; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.569
FSU_1715
Putative penicillin-binding protein; Identified by similarity to GB:AAB52536.1; match to protein family HMM PF00912.
 
  
 0.565
FSU_0253
Putative membrane-bound lytic murein transglycosylase D; Identified by similarity to SP:P23931; match to protein family HMM PF01464; match to protein family HMM PF01476.
 
  
 0.505
FSU_0764
Identified by match to protein family HMM PF01520.
 
   
 0.501
ftsE
Cell division ABC transporter, ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.473
FSU_2425
Putative cell division ABC transporter, permease protein FtsX; Identified by similarity to SP:P10122; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.460
FSU_0995
Putative penicillin-binding protein; Identified by similarity to SP:Q07868; match to protein family HMM PF00905; match to protein family HMM PF03793.
 
 
 0.455
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.