Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FSU_3242Glycosyltransferase domain protein; Identified by similarity to GB:AAN05762.1. (620 aa)    
Predicted Functional Partners:
FSU_3240
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF01041; match to protein family HMM PF01212; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.835
FSU_3241
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943; match to protein family HMM PF03023.
 
     0.832
FSU_3244
Glycosyltransferase, group 1 family; Identified by match to protein family HMM PF00534.
 
     0.654
FSU_3243
Conserved hypothetical protein; Identified by similarity to GB:AAO75149.1.
       0.624
FSU_2272
Alpha-galactosidase; Identified by match to protein family HMM PF02065; match to protein family HMM PF03422.
    
 0.531
axe6A
Acetyl xylan esterase AxeA; Identified by similarity to GB:AAC14690.1; match to protein family HMM PF03422; match to protein family HMM PF03629.
    
  0.508
FSU_0054
Putative acetylxylan esterase; Identified by similarity to GB:AAC14690.1; match to protein family HMM PF03629.
     
  0.483
FSU_0738
Cellulase-like protein; Identified by similarity to GB:BAA12070.1.
 
  
 0.478
FSU_3246
Conserved domain protein; Identified by similarity to PIR:G84004.
 
     0.445
FSU_1115
Putative pectinesterase; Identified by match to protein family HMM PF01095; match to protein family HMM PF03422.
    
 0.433
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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