STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB01185.1Putative glycosyltransferase; PFAM: Methyltransferase domain; Glycosyl transferase family 2. (1732 aa)    
Predicted Functional Partners:
AGB01186.1
Putative UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; TIGRFAM: nucleotide sugar dehydrogenase.
 
  
 0.942
AGB01183.1
TIGR00725 family protein; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein.
   
 0.867
AGB01184.1
Hypothetical protein.
  
 
 0.808
AGB02449.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.808
AGB01503.1
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase.
  
  
 0.728
AGB02338.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
  
 0.699
AGB02341.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
  
0.696
AGB02455.1
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).
 
  
 0.668
AGB02444.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
  
 0.656
AGB02347.1
Acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (three repeats).
 
  
 0.649
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.