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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB01639.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
AGB01640.1
Hypothetical protein.
       0.565
AGB01637.1
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
       0.550
AGB01638.1
Hypothetical protein.
       0.550
AGB01576.1
Hypothetical protein.
  
     0.455
AGB01642.1
PFAM: Macrocin-O-methyltransferase (TylF).
 
     0.435
AGB03873.1
Putative hemolysin; PFAM: Domain of unknown function (DUF333).
  
     0.425
AGB03811.1
Hypothetical protein.
  
     0.415
AGB03319.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.