close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB01727.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
AGB01726.1
PFAM: YeeE/YedE family (DUF395).
 
    0.990
AGB03421.1
PFAM: YeeE/YedE family (DUF395).
 
    0.795
AGB01725.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein.
  
    0.790
AGB03420.1
PFAM: YeeE/YedE family (DUF395).
 
    0.790
AGB01724.1
Uncharacterized protein involved in the oxidation of intracellular sulfur; PFAM: DsrE/DsrF-like family.
  
    0.623
AGB01722.1
Hypothetical protein.
       0.561
AGB01723.1
Hypothetical protein.
       0.561
AGB01728.1
Hypothetical protein.
       0.453
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.