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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB02348.1PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; UDP-N-acetylglucosamine 2-epimerase. (381 aa)    
Predicted Functional Partners:
AGB02349.1
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: N-acetylneuraminate synthase.
 
 
 0.995
AGB02346.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.925
AGB02350.1
TIGRFAM: N-acetyl sugar amidotransferase.
 
  
 0.916
AGB02354.1
CMP-N-acetylneuraminic acid synthetase; PFAM: Cytidylyltransferase.
 
  
 0.875
AGB02345.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.872
AGB02347.1
Acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (three repeats).
  
  
 0.843
AGB02961.1
Glycosyltransferase; PFAM: Pentapeptide repeats (8 copies); Glycosyl transferases group 1.
  
  
 0.837
AGB02353.1
TIGRFAM: N-acetyl sugar amidotransferase.
 
  
 0.835
AGB02351.1
Imidazoleglycerol-phosphate synthase; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; manually curated; Belongs to the HisA/HisF family.
 
  
 0.780
AGB01515.1
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.771
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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