STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB02691.1ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter. (475 aa)    
Predicted Functional Partners:
AGB02690.1
ABC-type cobalt transport system, permease component CbiQ; PFAM: Cobalt transport protein.
 
 
 0.981
AGB01786.1
ABC-type cobalt transport system, permease component CbiQ; PFAM: Cobalt transport protein.
 
 
 0.921
AGB02692.1
Hypothetical protein.
 
 0.911
AGB03670.1
PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
 
 
 0.880
AGB01991.1
PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
  
 
 0.851
AGB03240.1
PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
  
 
 0.851
AGB03751.1
Putative DNA-binding protein; PFAM: Protein of unknown function DUF134; Belongs to the UPF0251 family.
  
    0.684
AGB01992.1
Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
0.528
AGB03671.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 
 
0.525
AGB02360.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 
 
0.521
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.