Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB02919.1PFAM: Cache domain. (176 aa)    
Predicted Functional Partners:
AGB02575.1
PFAM: Cache domain.
  
  
 
0.905
AGB03051.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 
 0.721
AGB03899.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 
 0.720
AGB03269.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 
 0.719
AGB03904.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain; IMG reference gene:2509036964_SP.
 
 
 0.716
AGB02904.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 
 0.707
AGB02663.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 
 0.703
AGB02918.1
PFAM: Response regulator receiver domain.
  
 
 0.618
cheB
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.540
AGB02920.1
Hypothetical protein.
       0.524
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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