Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGB03103.1 | AGB03104.1 | Metfor_2096 | Metfor_2097 | Hypothetical protein; Manually curated. | Pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM superfamily. | 0.773 |
AGB03103.1 | AGB03105.1 | Metfor_2096 | Metfor_2098 | Hypothetical protein; Manually curated. | PFAM: Protein of unknown function DUF82. | 0.773 |
AGB03103.1 | pyrH | Metfor_2096 | Metfor_2095 | Hypothetical protein; Manually curated. | Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.562 |
AGB03104.1 | AGB03103.1 | Metfor_2097 | Metfor_2096 | Pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM superfamily. | Hypothetical protein; Manually curated. | 0.773 |
AGB03104.1 | AGB03105.1 | Metfor_2097 | Metfor_2098 | Pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM superfamily. | PFAM: Protein of unknown function DUF82. | 0.883 |
AGB03104.1 | pyrH | Metfor_2097 | Metfor_2095 | Pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM superfamily. | Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.610 |
AGB03105.1 | AGB03103.1 | Metfor_2098 | Metfor_2096 | PFAM: Protein of unknown function DUF82. | Hypothetical protein; Manually curated. | 0.773 |
AGB03105.1 | AGB03104.1 | Metfor_2098 | Metfor_2097 | PFAM: Protein of unknown function DUF82. | Pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM superfamily. | 0.883 |
AGB03105.1 | mptE | Metfor_2098 | Metfor_0388 | PFAM: Protein of unknown function DUF82. | Uncharacterized Rossmann fold enzyme; Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl- 7,8-dihydropterin diphosphate (6-HMDP); Belongs to the archaeal 6-HMPDK family. | 0.410 |
AGB03105.1 | pyrH | Metfor_2098 | Metfor_2095 | PFAM: Protein of unknown function DUF82. | Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.655 |
mptE | AGB03105.1 | Metfor_0388 | Metfor_2098 | Uncharacterized Rossmann fold enzyme; Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl- 7,8-dihydropterin diphosphate (6-HMDP); Belongs to the archaeal 6-HMPDK family. | PFAM: Protein of unknown function DUF82. | 0.410 |
pyrH | AGB03103.1 | Metfor_2095 | Metfor_2096 | Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP. | Hypothetical protein; Manually curated. | 0.562 |
pyrH | AGB03104.1 | Metfor_2095 | Metfor_2097 | Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP. | Pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM superfamily. | 0.610 |
pyrH | AGB03105.1 | Metfor_2095 | Metfor_2098 | Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP. | PFAM: Protein of unknown function DUF82. | 0.655 |