Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB03188.1Hypothetical protein. (275 aa)    
Predicted Functional Partners:
AGB02027.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.748
AGB02688.1
CARDB domain-containing protein; PFAM: CARDB.
  
     0.721
AGB02547.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
  
     0.713
AGB01350.1
Hypothetical protein.
  
     0.708
AGB01351.1
Alpha-galactosidase family protein; PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase.
  
     0.704
AGB01577.1
S-layer domain-containing protein.
  
     0.649
AGB03655.1
PEGA domain-containing protein; PFAM: PEGA domain.
  
     0.644
AGB01439.1
ABC-type Na+ efflux pump, permease component.
  
     0.640
AGB01119.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain; Bacterial Ig-like domain (group 1).
  
     0.639
AGB03650.1
Galactose-1-phosphate uridylyltransferase.
  
     0.631
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.