Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB03189.1Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase. (387 aa)    
Predicted Functional Partners:
AGB03885.1
Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
  
  
 0.865
AGB03190.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
  
  
 0.804
AGB03808.1
PFAM: Aldo/keto reductase family.
  
    0.791
AGB02266.1
PFAM: Conserved region in glutamate synthase; Belongs to the glutamate synthase family.
  
  
 0.774
AGB02059.1
Kef-type K+ transport system, predicted NAD-binding component; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family.
  
  
 0.706
AGB02303.1
Kef-type K+ transport system, predicted NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family.
  
  
 0.706
AGB03730.1
Kef-type K+ transport system, membrane component; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain.
  
  
 0.706
AGB01467.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
 
 0.705
AGB03546.1
Organic radical activating enzyme; PFAM: Radical SAM superfamily.
 
  
 0.682
AGB02694.1
PFAM: Aldehyde dehydrogenase family.
  
 
 0.674
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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