Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
AGB03206.1Peptidylarginine deiminase-like enzyme; PFAM: Porphyromonas-type peptidyl-arginine deiminase; Carbon-nitrogen hydrolase. (641 aa)    
Predicted Functional Partners:
pdaD
PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; Belongs to the PdaD family.
    
 0.906
AGB03208.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
       0.536
AGB03207.1
PFAM: Predicted membrane protein (DUF2178).
       0.528
AGB02150.1
Putative intracellular protease/amidase; PFAM: DJ-1/PfpI family.
  
 
 0.510
AGB03137.1
Putative intracellular protease/amidase; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family.
  
 
 0.510
AGB03205.1
Hypothetical protein.
       0.492
AGB01284.1
PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
 
  
 0.489
AGB02144.1
PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative.
  
   0.488
pstB
ABC-type phosphate transport system, ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
  
 0.473
pstB-2
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
  
 0.473
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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