Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
AGB03260.1Serine phosphatase RsbU, regulator of sigma subunit; PFAM: 5TMR of 5TMR-LYT; Stage II sporulation protein E (SpoIIE). (459 aa)    
Predicted Functional Partners:
AGB03259.1
Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.992
AGB03261.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
 
 
 0.951
AGB03219.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
 
 
 0.890
AGB03258.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
 
 
 0.846
AGB02985.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
 
 
 0.800
AGB01209.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
 
 
 0.785
cofG
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.
  
  
 0.690
AGB03262.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
 
     0.655
cofH
Radical SAM domain protein, CofH subfamily; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.
  
  
 0.650
AGB01221.1
Radical SAM domain protein, CofH subfamily; PFAM: Radical SAM superfamily; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; radical SAM domain protein, CofH subfamily.
  
  
 0.650
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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