Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGB02584.1 | AGB03440.1 | Metfor_1553 | Metfor_2440 | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.729 |
AGB02584.1 | AGB03725.1 | Metfor_1553 | Metfor_2740 | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | Growth inhibitor; PFAM: PemK-like protein. | 0.583 |
AGB03440.1 | AGB02584.1 | Metfor_2440 | Metfor_1553 | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.729 |
AGB03440.1 | AGB03441.1 | Metfor_2440 | Metfor_2441 | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. | 0.584 |
AGB03440.1 | AGB03725.1 | Metfor_2440 | Metfor_2740 | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | Growth inhibitor; PFAM: PemK-like protein. | 0.583 |
AGB03441.1 | AGB03440.1 | Metfor_2441 | Metfor_2440 | PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.584 |
AGB03725.1 | AGB02584.1 | Metfor_2740 | Metfor_1553 | Growth inhibitor; PFAM: PemK-like protein. | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.583 |
AGB03725.1 | AGB03440.1 | Metfor_2740 | Metfor_2440 | Growth inhibitor; PFAM: PemK-like protein. | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.583 |