STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI10733.1PFAM: regulatory protein TetR; KEGG: nml:Namu_1291 transcriptional regulator, TetR family. (204 aa)    
Predicted Functional Partners:
AEI10735.1
KEGG: sna:Snas_3665 hypothetical protein.
 
     0.930
AEI10734.1
KEGG: nml:Namu_1292 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.840
AEI10732.1
KEGG: mpd:MCP_2060 hypothetical protein.
       0.773
AEI13482.1
PFAM: helix-turn-helix HxlR type; KEGG: nml:Namu_2856 transcriptional regulator, HxlR family.
  
    0.421
AEI11158.1
PFAM: helix-turn-helix HxlR type; KEGG: sna:Snas_6277 transcriptional regulator, HxlR family.
  
    0.412
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.