STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI11055.1KEGG: cag:Cagg_1431 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (202 aa)    
Predicted Functional Partners:
AEI11053.1
KEGG: ade:Adeh_3089 hypothetical protein.
       0.773
AEI11054.1
Hypothetical protein; KEGG: scb:SCAB_1451 putative transporter component.
       0.773
AEI11056.1
KEGG: dma:DMR_34200 hypothetical protein.
       0.773
AEI10664.1
Manually curated; PFAM: ABC transporter related; YHS domain-containing protein; KEGG: nca:Noca_3775 ABC transporter related; SMART: AAA ATPase; TRASH domain-containing protein.
  
   
 0.770
AEI11193.1
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
     0.756
AEI11772.1
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
     0.751
AEI11057.1
KEGG: cac:CAC1079 hypothetical protein.
       0.714
AEI11580.1
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
     0.623
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
 
   0.563
AEI11190.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
     0.556
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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