STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI11374.1Transcriptional regulator, LysR family; KEGG: saq:Sare_3123 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding. (294 aa)    
Predicted Functional Partners:
AEI11373.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mva:Mvan_0310 lysine exporter protein LysE/YggA.
 
   
 0.962
AEI11611.1
KEGG: cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
   
  
 0.728
AEI12426.1
KEGG: putative transcriptional regulator.
   
    0.710
AEI11727.1
KEGG: iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor.
  
 
 0.666
AEI12324.1
PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; KEGG: glutamate synthase (ferredoxin).
  
  
 0.660
AEI13282.1
PFAM: Silent information regulator protein Sir2; KEGG: silent information regulator protein Sir2.
   
    0.602
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.602
AEI11472.1
KEGG: transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
   
  
 0.586
AEI11158.1
PFAM: helix-turn-helix HxlR type; KEGG: sna:Snas_6277 transcriptional regulator, HxlR family.
   
    0.570
AEI12226.1
PFAM: helix-turn-helix HxlR type; KEGG: jde:Jden_0924 transcriptional regulator, HxlR family.
   
    0.570
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.