STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI11784.1KEGG: alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. (581 aa)    
Predicted Functional Partners:
AEI12924.1
PFAM: aminoglycoside phosphotransferase; KEGG: aminoglycoside phosphotransferase.
 
 0.969
AEI11789.1
KEGG: glycosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
  
 
0.946
AEI12701.1
TIGRFAM: 4-alpha-glucanotransferase; KEGG: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
  
 
 0.938
AEI12923.1
TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; KEGG: trehalose synthase; SMART: alpha amylase catalytic sub domain.
 
  
 
0.928
AEI12183.1
KEGG: mjl:Mjls_2798 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
  
 
0.924
AEI11782.1
Alpha-amylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; KEGG: bfa:Bfae_06910 glycosidase; SMART: alpha amylase catalytic sub domain; alpha amylase all-beta.
 
  
 0.923
AEI12889.1
KEGG: alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
  
 
0.920
AEI13069.1
Alpha-galactosidase; KEGG: glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D.
  
 
 0.920
AEI11205.1
PFAM: PfkB domain protein; KEGG: PfkB domain protein.
 
 
 0.919
AEI11285.1
KEGG: stp:Strop_2001 alpha-amylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; glycoside hydrolase starch-binding; SMART: alpha amylase catalytic sub domain; alpha amylase all-beta.
 
  
 0.917
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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