Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI11163.1 | AEI12234.1 | Celgi_0644 | Celgi_1723 | KEGG: putative ABC transporter transmembrane protein. | KEGG: kfl:Kfla_3361 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.604 |
AEI12233.1 | AEI12234.1 | Celgi_1722 | Celgi_1723 | KEGG: kfl:Kfla_1959 hypothetical protein. | KEGG: kfl:Kfla_3361 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.903 |
AEI12233.1 | AEI12235.1 | Celgi_1722 | Celgi_1724 | KEGG: kfl:Kfla_1959 hypothetical protein. | PFAM: regulatory protein TetR; KEGG: gym:GYMC10_3172 transcriptional regulator, TetR family. | 0.553 |
AEI12234.1 | AEI11163.1 | Celgi_1723 | Celgi_0644 | KEGG: kfl:Kfla_3361 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: putative ABC transporter transmembrane protein. | 0.604 |
AEI12234.1 | AEI12233.1 | Celgi_1723 | Celgi_1722 | KEGG: kfl:Kfla_3361 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: kfl:Kfla_1959 hypothetical protein. | 0.903 |
AEI12234.1 | AEI12235.1 | Celgi_1723 | Celgi_1724 | KEGG: kfl:Kfla_3361 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. | PFAM: regulatory protein TetR; KEGG: gym:GYMC10_3172 transcriptional regulator, TetR family. | 0.553 |
AEI12235.1 | AEI12233.1 | Celgi_1724 | Celgi_1722 | PFAM: regulatory protein TetR; KEGG: gym:GYMC10_3172 transcriptional regulator, TetR family. | KEGG: kfl:Kfla_1959 hypothetical protein. | 0.553 |
AEI12235.1 | AEI12234.1 | Celgi_1724 | Celgi_1723 | PFAM: regulatory protein TetR; KEGG: gym:GYMC10_3172 transcriptional regulator, TetR family. | KEGG: kfl:Kfla_3361 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.553 |