STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI12320.1KEGG: type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase. (557 aa)    
Predicted Functional Partners:
AEI12318.1
PFAM: Type II secretion system F domain; KEGG: type II secretion system F domain protein.
 
 
 0.997
AEI12317.1
KEGG: kra:Krad_3025 secretory protein.
 
 
 0.957
AEI12309.1
KEGG: type IV pilus assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: cell division protein FtsA.
 
 
 0.927
AEI12310.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.914
AEI12308.1
PFAM: Fimbrial assembly family protein; KEGG: fimbrial assembly family protein.
 
 
 0.830
AEI12315.1
KEGG: kra:Krad_3022 hypothetical protein.
  
 
 0.818
AEI12316.1
KEGG: kra:Krad_3023 hypothetical protein.
  
 
 0.818
AEI12307.1
KEGG: hypothetical protein.
 
 
 0.807
AEI12319.1
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: twitching motility protein; SMART: AAA ATPase.
 
  
0.760
AEI11732.1
Soluble ligand binding domain protein; KEGG: bcv:Bcav_1737 competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1.
  
  
 0.570
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.