STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI12345.1KEGG: cmi:CMM_1462 hypothetical protein. (1271 aa)    
Predicted Functional Partners:
AEI12305.1
PFAM: Fibronectin type III domain protein; KEGG: nmr:Nmar_1073 fibronectin type III domain-containing protein.
 
     0.782
AEI11364.1
KEGG: rca:Rcas_2946 Ig family protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Ig family protein.
 
   
 0.781
AEI12824.1
KEGG: bfs:BF2899 hypothetical protein.
  
     0.774
AEI12661.1
KEGG: mab:MAB_4582c hypothetical protein.
  
     0.771
AEI13444.1
SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: scb:SCAB_91001 hypothetical protein.
  
     0.770
AEI11366.1
KEGG: hypothetical protein.
  
     0.765
AEI12188.1
KEGG: vap:Vapar_3422 hypothetical protein.
  
     0.760
AEI13456.1
KEGG: cellulose-binding family II; PFAM: cellulose-binding family II; SMART: cellulose-binding family II.
 
     0.752
AEI12632.1
PFAM: aminoglycoside phosphotransferase; KEGG: cwo:Cwoe_5845 aminoglycoside phosphotransferase.
  
     0.743
AEI12365.1
KEGG: cmi:CMM_2484 hypothetical protein.
  
    0.740
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.