STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI12392.1Glycoside hydrolase family 10; KEGG: cms:CMS_0087 putative sugar hydrolase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10. (418 aa)    
Predicted Functional Partners:
AEI12391.1
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: tRNA/rRNA methyltransferase (SpoU).
       0.713
AEI12393.1
PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily MFS_1.
 
     0.713
AEI12898.1
PFAM: extracellular solute-binding protein family 1; KEGG: jde:Jden_2072 extracellular solute-binding protein family 1.
 
     0.635
AEI12902.1
KEGG: endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; polysaccharide deacetylase; Carbohydrate-binding CenC domain protein; SMART: glycoside hydrolase family 10; Immunoglobulin subtype.
 
   
 0.532
AEI13179.1
Alpha-N-arabinofuranosidase; PFAM: Ricin B lectin; KEGG: alpha-N-arabinofuranosidase; SMART: Ricin B lectin.
 
   0.518
AEI13625.1
KEGG: tfu:Tfu_1612 cellulose-binding family II protein; PFAM: cellulose-binding family II; SMART: cellulose-binding family II.
 
     0.505
AEI12394.1
KEGG: chitin-binding domain 3 protein; PFAM: chitin-binding domain 3 protein; cellulose-binding family II; SMART: cellulose-binding family II.
 
     0.485
AEI13057.1
PFAM: glycoside hydrolase family 43; KEGG: jde:Jden_0510 glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.436
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.