STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI12427.1PFAM: Integrase catalytic region; KEGG: integrase catalytic region. (335 aa)    
Predicted Functional Partners:
AEI12429.1
PFAM: ABC-2 type transporter; KEGG: ABC-type multidrug transport system, permease component.
  
    0.753
AEI12428.1
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.752
AEI12430.1
PFAM: cytochrome oxidase assembly; KEGG: uncharacterized protein required for cytochrome oxidase assembly.
       0.521
AEI12423.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: Rieske (2Fe-2S) iron-sulfur domain protein.
       0.439
AEI12424.1
KEGG: FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein.
       0.439
AEI12425.1
KEGG: FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein.
       0.439
AEI12426.1
KEGG: putative transcriptional regulator.
       0.439
AEI10755.1
KEGG: ATP-binding protein.
  
 
 0.426
AEI13295.1
KEGG: apt:APA01_43700 ATP-binding protein.
  
 
 0.426
AEI12422.1
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: FeS assembly ATPase SufC; SMART: AAA ATPase.
       0.401
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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