STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI12473.1PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: peptidase S1 and S6 chymotrypsin/Hap. (254 aa)    
Predicted Functional Partners:
AEI12472.1
KEGG: hypothetical protein.
       0.841
arc
PFAM: AAA ATPase central domain protein; KEGG: AAA ATPase central domain protein; SMART: AAA ATPase.
   
 0.684
AEI12471.1
PFAM: major facilitator superfamily MFS_1; KEGG: saq:Sare_0984 major facilitator transporter.
       0.539
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
 
   
 0.517
AEI12474.1
KEGG: bcv:Bcav_2387 hypothetical protein.
       0.511
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.474
AEI11431.1
Putative signal transduction histidine kinase; PFAM: PspC domain protein; ATP-binding region ATPase domain protein; KEGG: putative signal transduction histidine kinase.
  
  
 0.447
AEI10718.1
PFAM: protein of unknown function DUF742; KEGG: protein of unknown function DUF742.
  
 
  0.416
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
 
   0.415
AEI10814.1
KEGG: HhH-GPD family protein; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop.
  
   
 0.411
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.