STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI12755.1PFAM: YCII-related; KEGG: bcv:Bcav_2256 YCII-related protein. (114 aa)    
Predicted Functional Partners:
AEI13523.1
KEGG: putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein.
 
     0.799
AEI12756.1
KEGG: hypothetical protein.
       0.642
AEI12718.1
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bcv:Bcav_1056 activator of HSP90 ATPase 1 family protein.
 
     0.483
AEI10604.1
KEGG: YCII-related protein.
  
     0.428
AEI12754.1
Cellulose-binding family II; KEGG: sro:Sros_5719 hypothetical protein; PFAM: cellulose-binding family II; lipolytic protein G-D-S-L family; SMART: cellulose-binding family II.
       0.408
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.