STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI13065.1PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: TrkA-N domain protein. (233 aa)    
Predicted Functional Partners:
AEI13064.1
KEGG: H(+)-transporting two-sector ATPase; PFAM: cation transporter.
 
 
 0.989
AEI13063.1
KEGG: histone deacetylase; PFAM: histone deacetylase superfamily.
       0.658
AEI12277.1
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: Fmu (Sun) domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.630
AEI10618.1
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: kse:Ksed_19290 molybdopterin synthase subunit MoaE.
   
    0.601
AEI13066.1
PFAM: protein of unknown function DUF344; KEGG: protein of unknown function DUF344.
  
    0.541
AEI13062.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: DNA binding domain protein, excisionase family.
  
    0.490
AEI13596.1
Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.440
AEI11553.1
PFAM: Uroporphyrinogen III synthase HEM4; transcriptional regulator domain-containing protein; KEGG: uroporphyrinogen III synthase HEM4.
  
    0.431
Your Current Organism:
Cellulomonas gilvus
NCBI taxonomy Id: 593907
Other names: C. gilvus ATCC 13127, Cellulomonas gilvus ATCC 13127, Cellulomonas gilvus str. ATCC 13127, Cellulomonas gilvus strain ATCC 13127, Cellvibrio gilvus ATCC 13127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.