Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PADI1Peptidyl arginine deiminase 1. (668 aa)    
Predicted Functional Partners:
NLRP5
NACHT domain-containing protein.
   
 
 0.767
G1P2I0_MYOLU
MOEP19 domain-containing protein.
    
 
 0.710
RSL24D1
Ribosomal L24 domain containing 1.
    
 
 0.687
G1PSF3_MYOLU
Uncharacterized protein.
    
 
 0.671
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
    
 
 0.664
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
    
 
 0.664
STAP2
Signal transducing adaptor family member 2.
    
 
 0.601
TES
Testin LIM domain protein.
      
 0.597
GLYATL2
Glycine-N-acyltransferase like 2.
      
 0.587
MDM2
MDM2 proto-oncogene.
    
 
 0.570
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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