STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX16Sorting nexin 16. (340 aa)    
Predicted Functional Partners:
VPS26A
VPS26, retromer complex component A.
   
 
 0.779
SNX2
Sorting nexin 2.
      
 0.654
FCHSD2
FCH and double SH3 domains 2.
    
 
 0.642
SNX15
Sorting nexin 15.
     
 0.641
SNX4
Sorting nexin 4.
      
 0.630
SNX10
Sorting nexin 10.
     
 0.618
SNX11
Sorting nexin 11.
     
 0.618
COMMD9
COMM domain containing 9.
      
 0.617
SNX13
Sorting nexin 13.
      
0.612
ARFGAP2
ADP ribosylation factor GTPase activating protein 2.
     
 0.575
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.