Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BATF2 | PCGF5 | ENSMLUP00000013956 | ENSMLUP00000014000 | Basic leucine zipper ATF-like transcription factor 2. | Polycomb group ring finger 5. | 0.495 |
BATF2 | THEMIS2 | ENSMLUP00000013956 | ENSMLUP00000000135 | Basic leucine zipper ATF-like transcription factor 2. | Thymocyte selection associated family member 2. | 0.638 |
ECEL1 | SYTL1 | ENSMLUP00000004120 | ENSMLUP00000001645 | Endothelin converting enzyme like 1. | Synaptotagmin like 1. | 0.675 |
ECEL1 | THEMIS2 | ENSMLUP00000004120 | ENSMLUP00000000135 | Endothelin converting enzyme like 1. | Thymocyte selection associated family member 2. | 0.675 |
G1PUH5_MYOLU | THEMIS2 | ENSMLUP00000014933 | ENSMLUP00000000135 | PH domain-containing protein. | Thymocyte selection associated family member 2. | 0.677 |
GRB2 | THEMIS2 | ENSMLUP00000013902 | ENSMLUP00000000135 | Growth factor receptor bound protein 2. | Thymocyte selection associated family member 2. | 0.787 |
PACSIN2 | SMPDL3B | ENSMLUP00000004195 | ENSMLUP00000021522 | Protein kinase C and casein kinase substrate in neurons 2. | Acid sphingomyelinase-like phosphodiesterase. | 0.720 |
PACSIN2 | TCIRG1 | ENSMLUP00000004195 | ENSMLUP00000016062 | Protein kinase C and casein kinase substrate in neurons 2. | V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. | 0.581 |
PACSIN2 | THEMIS2 | ENSMLUP00000004195 | ENSMLUP00000000135 | Protein kinase C and casein kinase substrate in neurons 2. | Thymocyte selection associated family member 2. | 0.757 |
PACSIN2 | XKR8 | ENSMLUP00000004195 | ENSMLUP00000000140 | Protein kinase C and casein kinase substrate in neurons 2. | XK-related protein. | 0.729 |
PCGF5 | BATF2 | ENSMLUP00000014000 | ENSMLUP00000013956 | Polycomb group ring finger 5. | Basic leucine zipper ATF-like transcription factor 2. | 0.495 |
PCGF5 | THEMIS2 | ENSMLUP00000014000 | ENSMLUP00000000135 | Polycomb group ring finger 5. | Thymocyte selection associated family member 2. | 0.676 |
SMPDL3B | PACSIN2 | ENSMLUP00000021522 | ENSMLUP00000004195 | Acid sphingomyelinase-like phosphodiesterase. | Protein kinase C and casein kinase substrate in neurons 2. | 0.720 |
SMPDL3B | TCIRG1 | ENSMLUP00000021522 | ENSMLUP00000016062 | Acid sphingomyelinase-like phosphodiesterase. | V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. | 0.616 |
SMPDL3B | THEMIS2 | ENSMLUP00000021522 | ENSMLUP00000000135 | Acid sphingomyelinase-like phosphodiesterase. | Thymocyte selection associated family member 2. | 0.769 |
SMPDL3B | XKR8 | ENSMLUP00000021522 | ENSMLUP00000000140 | Acid sphingomyelinase-like phosphodiesterase. | XK-related protein. | 0.782 |
SYTL1 | ECEL1 | ENSMLUP00000001645 | ENSMLUP00000004120 | Synaptotagmin like 1. | Endothelin converting enzyme like 1. | 0.675 |
SYTL1 | THEMIS2 | ENSMLUP00000001645 | ENSMLUP00000000135 | Synaptotagmin like 1. | Thymocyte selection associated family member 2. | 0.675 |
TCIRG1 | PACSIN2 | ENSMLUP00000016062 | ENSMLUP00000004195 | V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. | Protein kinase C and casein kinase substrate in neurons 2. | 0.581 |
TCIRG1 | SMPDL3B | ENSMLUP00000016062 | ENSMLUP00000021522 | V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. | Acid sphingomyelinase-like phosphodiesterase. | 0.616 |
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