ZDHHC3 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ZDHHC3

Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (326 aa)

Predicted Functional Partners:

GABRE

0.764

PREP

0.754

POT1

0.737

ACD

0.732

SLC9A3R1

0.722

WRN

0.720

ZDHHC13

0.705

GOLGA7

0.693

GOLGA7B

0.693

ZDHHC8

0.686

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACD	POT1	ENSMLUP00000004796	ENSMLUP00000001704	ACD shelterin complex subunit and telomerase recruitment factor.	Protection of telomeres 1.	0.999
ACD	WRN	ENSMLUP00000004796	ENSMLUP00000005366	ACD shelterin complex subunit and telomerase recruitment factor.	WRN RecQ like helicase.	0.870
ACD	ZDHHC3	ENSMLUP00000004796	ENSMLUP00000000651	ACD shelterin complex subunit and telomerase recruitment factor.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.732
ACD	ZDHHC8	ENSMLUP00000004796	ENSMLUP00000015994	ACD shelterin complex subunit and telomerase recruitment factor.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.732
GABRE	SLC9A3R1	ENSMLUP00000020764	ENSMLUP00000002960	Gamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	0.620
GABRE	ZDHHC3	ENSMLUP00000020764	ENSMLUP00000000651	Gamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.764
GOLGA7	ZDHHC3	ENSMLUP00000013207	ENSMLUP00000000651	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.693
GOLGA7	ZDHHC8	ENSMLUP00000013207	ENSMLUP00000015994	Golgin A7.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.882
GOLGA7B	ZDHHC3	ENSMLUP00000014548	ENSMLUP00000000651	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.693
GOLGA7B	ZDHHC8	ENSMLUP00000014548	ENSMLUP00000015994	Golgin A7 family member B.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.831
POT1	ACD	ENSMLUP00000001704	ENSMLUP00000004796	Protection of telomeres 1.	ACD shelterin complex subunit and telomerase recruitment factor.	0.999
POT1	WRN	ENSMLUP00000001704	ENSMLUP00000005366	Protection of telomeres 1.	WRN RecQ like helicase.	0.962
POT1	ZDHHC3	ENSMLUP00000001704	ENSMLUP00000000651	Protection of telomeres 1.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.737
POT1	ZDHHC8	ENSMLUP00000001704	ENSMLUP00000015994	Protection of telomeres 1.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.737
PREP	ZDHHC3	ENSMLUP00000007074	ENSMLUP00000000651	Prolyl endopeptidase.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.754
SLC9A3R1	GABRE	ENSMLUP00000002960	ENSMLUP00000020764	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	Gamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.620
SLC9A3R1	ZDHHC3	ENSMLUP00000002960	ENSMLUP00000000651	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.722
WRN	ACD	ENSMLUP00000005366	ENSMLUP00000004796	WRN RecQ like helicase.	ACD shelterin complex subunit and telomerase recruitment factor.	0.870
WRN	POT1	ENSMLUP00000005366	ENSMLUP00000001704	WRN RecQ like helicase.	Protection of telomeres 1.	0.962
WRN	ZDHHC3	ENSMLUP00000005366	ENSMLUP00000000651	WRN RecQ like helicase.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.720