Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Cms1 ribosomal small subunit homolog. (263 aa)    
Predicted Functional Partners:
WDR36
WD repeat domain 36.
   
  0.970
NOL6
Nucleolar protein 6.
   
 0.963
UTP6
UTP6 small subunit processome component.
   
  0.945
UTP23
UTP23 small subunit processome component.
   
  
 0.944
UTP4
WD_REPEATS_REGION domain-containing protein.
   
  0.943
G1QAA7_MYOLU
Uncharacterized protein.
   
  0.943
G1PZM2_MYOLU
BP28CT domain-containing protein.
   
  0.929
LOC102431252
BP28CT domain-containing protein.
   
  0.929
G1P3B5_MYOLU
Uncharacterized protein.
   
  0.927
MPHOSPH10
Uncharacterized protein.
   
  0.896
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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