Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTREXMtr4 exosome RNA helicase. (1043 aa)    
Predicted Functional Partners:
EXOSC10
Exosome component 10.
   
 0.999
ZCCHC8
Zinc finger CCHC-type containing 8.
    
 0.999
RBM7
RRM domain-containing protein.
    
 0.998
WDR3
WD repeat domain 3.
   
 0.997
EXOSC9
Exosome component 9.
   
 0.997
EXOSC2
Exosome component 2.
   
 0.997
EXOSC1
Exosome component 1.
   
 0.997
ZFC3H1
Zinc finger C3H1-type containing.
    
 0.997
EXOSC7
Exosome component 7.
   
 0.997
G1Q6E6_MYOLU
KH_dom_type_1 domain-containing protein.
   
 0.997
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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