STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK3AUroplakin 3A. (287 aa)    
Predicted Functional Partners:
UPK1A
Uroplakin 1A; Belongs to the tetraspanin (TM4SF) family.
   
 
 0.808
UPK2
Uroplakin 2.
   
  
 0.800
UPK1B
Tetraspanin.
   
 
 0.795
PPM1B
PPM-type phosphatase domain-containing protein.
      
 0.699
ZNF512B
Zinc finger protein 512B.
      
 0.686
ZFAND3
Zinc finger AN1-type containing 3.
      
 0.683
FGD6
FYVE, RhoGEF and PH domain containing 6.
      
 0.682
CLNK
Cytokine dependent hematopoietic cell linker.
      
 0.676
KRT20
Keratin 20; Belongs to the intermediate filament family.
      
 0.646
TESC
Tescalcin.
      
 0.626
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.