STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAC2UBA domain containing 2. (215 aa)    
Predicted Functional Partners:
FAF2
Fas associated factor family member 2.
    
 
 0.993
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.991
UBXN8
UBX domain protein 8.
    
 
 0.945
UFD1
Uncharacterized protein.
    
 
 0.944
ENSMLUP00000017946
annotation not available
    
 
 0.944
FAF1
Fas associated factor 1.
    
 
 0.928
AMFR
Autocrine motility factor receptor.
    
 
 0.838
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
  
 0.745
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
   
  
 0.732
SYVN1
Synoviolin 1.
    
 
 0.732
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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