STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMWDDM1 locus, WD repeat containing. (526 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
    
 0.979
USP46
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
   
 0.950
USP12
Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family.
   
 0.950
SYMPK
Symplekin.
 
  
 0.925
USP1
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 0.909
USP38
Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family.
   
 0.909
USP35
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 0.909
ZC3H6
Zinc finger CCCH-type containing 6.
    
 0.845
TAF12
TATA-box binding protein associated factor 12.
   
 0.837
TEX10
Testis expressed 10.
   
 0.834
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.